Kitty Meeks (Glasgow): Exploiting structure in multi-layer networks: a case study on motif counting (School Seminar)

Abstract:

Many real-world systems are most naturally modelled by “multi-layer” networks, which allow for different types of connections between entities; it is therefore important to develop efficient algorithms to extract information from such networks. However, most existing results concerning the structural properties of graphs/networks which allow us to solve NP-hard problems efficiently consider only the case of a “single-layer” graph (in which each pair of vertices is either adjacent or not). A natural question to ask is whether, if each individual layer has well-understood structure which allows the design of efficient algorithms, we can still exploit this structure to solve problems on the combined, multi-layer network. We address this question for the specific problem of counting small substructures in the network: in most cases the problem becomes intractable on the combined network, but we identify one case in which structural restrictions on the individual layers can be exploited effectively.

This is joint work with Jessica Enright (University of Stirling).

Speaker Bio:

Kitty Meeks obtained her PhD from the University of Oxford in 2013, and from 2012 to 2014 worked as a Postdoctoral Research Assistant at Queen Mary University of London. She joined the University of Glasgow in 2014, initially to the School of Mathematics and Statistics, before moving across the road to the School of Computing Science in 2016. She currently holds a Royal Society of Edinburgh Personal Research Fellowship for the project “Exploiting Realistic Graph Structure”.

Event details

  • When: 14th February 2018 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

Kami Vaniea (Edinburgh): Usable Security: From URLs to Updates (School Seminar)

Abstract:

Usable security is about exploring the relationship between the tools
which are supposed to keep people safe and the ways that people interact
with them. In this talk, I will be discussing two of my recent projects:
URL readability and reasons for avoiding software updates. URLs are a
nearly ubiquitous method of telling another person where to find
content. They are used extensively in emails, social networking and
other communications. The security community complains about people
clicking on fraudulent URLs, yet surprisingly little is known about how
people parse and interpret them. Similarly, software updates are
becoming a common feature of using a computing device, many of which
demand to be updated daily, if not hourly. Security experts agree that
installing updates is one of the best ways to stay safe, yet many people
avoid updating. I will discuss studies my lab has run on both of these
topics.

Speaker Bio:

Dr Kami Vaniea is a Lecturer at the University of Edinburgh studying
human factors of security and privacy. She heads the Technology
Usability Lab In Privacy and Security (TULIPS) which looks at many
different aspects of usability, prvaicy and security including
educational game design, internet of things, and software updating.
Previously Dr Vaniea was an Assistant Professor at Indiana University, a
post doc researcher at Michigan State University and completed her PhD
at Carnegie Mellon University.

Event details

  • When: 6th February 2018 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

Cecilia Mascolo (Cambridge): Systems, Models and Learning: From mobile devices to mobile data (School Seminar)

Abstract:

This talk concentrates on our efforts over the years to make the harvesting of relevant data from mobile devices accurate and efficient, to allow on device data interpretation and to produce models able to interpret the data so that it can be exploited for a wide range of applications. In this sense I will describe specifics of our work which range from fitting mobile sensing inference on devices and how we are able to exploit local device heterogeneous computation resources efficiently to data analytics for mobile health and urban computing. I will discuss challenges and opportunities of the field throughout the talk.

Speaker Bio:

Cecilia Mascolo is a mother of a teenage daughter. She is also Full Professor of Mobile Systems in the Computer Laboratory, University of Cambridge, UK, a Fellow of Jesus College Cambridge and a Faculty Fellow at the Alan Turing Institute for Data Science in London. Prior joining Cambridge in 2008, she has been a faculty member in the Department of Computer Science at University College London. She holds a PhD from the University of Bologna. Her research interests are in human mobility modelling, mobile and sensor systems and networking and spatio-temporal data analysis. She has published in a number of top tier conferences and journals in the area and her investigator experience spans projects funded by Research Councils and industry. She has received numerous best paper awards and in 2016 was listed in “10 Women in Networking /Communications You Should Know”. She has served as steering, organizing and programme committee member of mobile, sensor systems, networking, data science conferences and workshops. She has delivered a number of keynote talks at conferences and workshops in the area of mobility, data science, pervasive computing and systems. She is Associate Editor in Chief for IEEE Pervasive Computing and sits on the editorial boards of IEEE Transactions on Mobile Computing, ACM Transactions on Sensor Networks and ACM Transactions on Interactive, Mobile, Wearable and Ubiquitous Technologies. More details at www.cl.cam.ac.uk/users/cm542.

Event details

  • When: 30th January 2018 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

Adriana Wilde (St Andrews): Rising to challenges in assessment, feedback and encouraging gender diversity in computing (School Seminar)

Abstract

This talk is in two parts, in the first of which Adriana will focus on her experiences in assessment and feedback in large classes, and in the second part on her work in encouraging gender diversity in computer science.

The focus of the first part will be on her involvement in redesigning an undergraduate module on HCI, where the methods of assessment used were no suitable for increasingly larger classes (up to 160 students). Redesign decisions needed to preserve the validity and reliability of the assessment whilst respecting the need for timely feedback. Adriana will specifically talk about the exam and coursework, and how learning activities in the module were aligned to the assessment, through the use of PeerWise for student-authored MCQs, and the use of video for assessment to foster creativity and application of knowledge. During the talk, there will be an opportunity for discussion on the challenges then encountered.

A (shorter) second part of the talk will present her experiences in supporting women in computing, starting with a very small-scale intervention with staff and students at her previous institution, and concluding with her engagement at the Early Career Women’s Network in St Andrews.

Event details

  • When: 23rd January 2018 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

Edgar Chavez (CICESE): The Metric Approach to Reverse Searching (School Seminar)

Abstract:
Searching for complex objects (e.g. images, faces, audio or video), is an everyday problem in computer science, motivated by many applications. Efficient algorithms are demanded for reverse searching, also known as query by content, in large repositories. Current industrial solutions are ad hoc, domain-dependant, hardware intensive and have limited scaling. However, those disparate domains can be modelled, for indexing and searching, as a metric space. This model has been championed to become a solution to generic proximity searching problems. In practice, however, the metric space approach has been limited by the amount of main memory available.

In this talk we will explore the main ideas behind this technology, present a successful example in audio indexing and retrieval. The application scales well for large amounts of audio because the representation is quite compact and the full audio streams are not needed for indexing and searching.

Speaker Bio:
Edgar Chavez received his Phd from the Center for Mathematical Research in Guanajuato, Mexico in 1999. He founded the information retrieval group at Universidad Michoacana where he worked until 2012. After a brief period in the Institute of Mathematics in UNAM, he joined the computer science department in CICESE in 2013, where he founded the data science group. His main research interest include access and retrieval of data and data representation, such as fingerprints and point clouds. In 2009 he obtained the Thompson-Reuters award for having the most cited paper in computer science in Mexico and Latin America. In 2008 he co-funded, with Gonzalo Navarro, the conference Similarity Search and Applications, which is an international reference in the area. He has published more than 100 scientific contributions, with about 3500 citations in google scholar.

Event details

  • When: 5th December 2017 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

PhD viva success: Adam Barwell

Congratulations to Adam Barwell, who successfully defended his thesis yesterday. Adam’s thesis was supervised by Professor Kevin Hammond. He is pictured with second supervisor Dr Christopher Brown, Internal examiner Dr Susmit Sarkar and external examiner Professor Susan Eisenbach from Imperial College, London.

SRG Seminar: “Simulating a pulmonary tuberculosis infection using a network-based metapopulation model” by Michael Pitcher and “A Fake City of People: Modeling the Co-evolution of City and Citizens” by Xue Guo

Event details
When: 28th September 2017 13:00 – 14:00
Where: Cole 1.33b
Series: Systems Seminars Series
Format: Seminar

Michael Pitcher’s abstract

Tuberculosis (TB) is one of the world’s most deadly infectious diseases, claiming over 1.4 million lives every year. TB infections typically affect the lungs and treatment regimens are long and arduous, requiring at least 6 months of daily chemotherapy. Previous investigations have shown TB to have unique localisations within the lung at varying stages of infection. The initial implant and the primary lesion which arises from it can occur anywhere in the lungs, with a greater probability of occurrence in the lower to middle regions of the lung. However, reactivation of a previously latent form of disease always involves cavitation of the tissue at the apical regions. This difference in spatial location of TB infections suggests two important factors: i) bacteria are able to disseminate across the lung in some manner, and ii) the environment at the top of the lung has some properties that make it preferential for TB replication.

In this project, we aim to build a whole-organ model of the lung and surrounding lymphatics which incorporates both bacterial dissemination possibilities and lung tissue spatial heterogeneity in order to understand their impact on TB. We develop ComMeN (Compartmentalised Metapopulation Network), a Python framework designed to allow the easy creation of complex network-based metapopulations with spatial heterogeneity upon which interaction dynamics can be applied, with discrete event modelling using the Gillespie Algorithm. We then extend this framework to create a TB-specific model, PTBComMeN, which models a TB infection occurring over lung tissue which is divided into patches, each of which contains spatial attributes appropriate to its position in the lung, such as ventilation, perfusion and oxygen tension. Events dictate the interactions between cells and bacteria and their interaction with the environment, with dissemination occurring between edges joining patches on the lung network. This model allows experimentation into studying the effects spatial heterogeneities and bacterial dissemination may have on the progression of disease and the model is designed to provide insight into the factors that result in long treatment times for TB.

Xue Guo’s abstract

By the year 2050, the global urban population will reach 2.5 billion. While the fast pace of urbanisation brings improved quality of life initially, the surging population will inevitably lead to unique urban issues. Emerging research fields, with the aim of creating smarter cities, plan to counteract these problems. To facilitate this research, we need solid models to generate ’fake cities’, which cannot be easily produced by existing random graph algorithms due to spatial constraints. Therefore, we propose a new model for the co-evolution of city and population, which can show how street network forms, how population spreads and how settlements emerge and diminish. The new model will be a random city generator, which could be used to backtrack the history and predict the future of a city, or act as test cases for the validation and evaluation of urban optimisation algorithms.

Event details

  • When: 28th September 2017 13:00 - 14:00
  • Where: Cole 1.33b
  • Series: School Seminar Series, Systems Seminars Series
  • Format: Seminar

Daniel Sorin (Duke University): Designing Formally Verifiable Cache Coherence Protocol (School Seminar)

Abstract:
The cache coherence protocol is an important but notoriously complicated part of a multicore processor. Typical protocols are far too complicated to verify completely and thus industry relies on extensive testing in hopes of uncovering bugs. In this work, we propose a verification-aware approach to protocol design, in which we design scalable protocols such that they can be completely formally verified. Rather than innovate in verification techniques, we use existing verification techniques and innovate in the design of the protocols. We present two design methodologies that, if followed, facilitate verification of arbitrarily scaled protocols. We discuss the impact of the constraints that must be followed, and we highlight possible future directions in verification-aware microarchitecture.

Speaker Bio:
Daniel J. Sorin is the Addy Professor of Electrical and Computer Engineering at Duke University. His research interests are in computer architecture, with a focus on fault tolerance, verification, and memory system design. He is the author of “Fault Tolerant Computer Architecture” and a co-author of “A Primer on Memory Consistency and Cache Coherence.” He is the recipient of a SICSA Distinguished Visiting Fellowship, a National Science Foundation Career Award, and Duke’s Imhoff Distinguished Teaching Award. He received a PhD and MS in electrical and computer engineering from the University of Wisconsin, and he received a BSE in electrical engineering from Duke University.

Event details

  • When: 26th September 2017 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

Felipe Meneguzzi (PUCRS): Plan Recognition in the Real World (School Seminar)

Abstract:
Plan and goal recognition is the task of inferring the plan and goal of an agent through the observation of its actions and its environment and has a number of applications on computer-human interaction, assistive technologies and surveillance.
Although such techniques using planning domain theories have developed a number of very accurate and effective techniques, they often rely on assumptions of full observability and noise-free observations.
These assumptions are not necessarily true in the real world, regardless of the technique used to translate sensor data into symbolic logic-based observations.
In this work, we develop plan recognition techniques, based on classical planning domain theories, that can cope with observations that are both incomplete and noisy and show how they can be applied to sensor data processed through deep learning techniques.
We evaluate such techniques on a kitchen video dataset, bridging the gap between symbolic goal recognition and real-world data.

Speaker Bio:
Dr. Felipe Meneguzzi is a researcher on multiagent systems, normative reasoning and automated planning. He is currently an associate professor at Pontifícia Universidade Católica do Rio Grande do Sul (PUCRS). Prior to that appointment he was a Project Scientist at the Robotics Institute at Carnegie Mellon University in the US. Felipe got his PhD at King’s College London in the UK and an undergraduate and masters degree at PUCRS in Brazil. He received the 2016 Google Research Awards for Latin America, and was one of four runners up to 2013 Microsoft Research Awards. His current research interests include plan recognition, hybrid planning and norm reasoning.

Slides from the talk

Event details

  • When: 19th September 2017 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar

Mark Olleson (Bloomberg): Super-sized mobile apps: getting the foundations right (School Seminar)

Abstract:
An email client. An instant messenger. A real-time financial market data viewer and news reader. A portfolio viewer. A note taker, file manager, media viewer, flight planner, restaurant finder… All built into one secure mobile application. On 4 different mobile operating systems. Does this sound challenging?
Mark from Bloomberg’s Mobile team will discuss how conventional development tools and techniques scale poorly when faced with this challenge, and how Bloomberg tackles the problem.

Speaker Bio:
Mark Olleson is a software engineer working in Bloomberg’s Mobile Professional team. Mark start developing iOS apps around the time the original iPad launched, and since has worked on projects which share common characteristics: scale and complexity. Today he specialises in large-scale and cross-platform mobile-app technology.

Event details

  • When: 17th October 2017 14:00 - 15:00
  • Where: Cole 1.33a
  • Series: School Seminar Series
  • Format: Seminar